Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase | ALP24_00708 | Not Available | Negative | 2848130 - 2849422 | 47138.5 |
| phosphoribosylformylglycinamidine synthase | ALP24_00709 | Not Available | Negative | 2849445 - 2852024 | 93246.6 |
| membrane-bound lytic murein transglycosylase f | ALP24_00710 | Not Available | Positive | 2852214 - 2853737 | 57076.9 |
| multicopper oxidase | ALP24_100294 | Not Available | Negative | 2854243 - 2855757 | 56198.6 |
| hypothetical protein | ALP24_00711 | Not Available | Negative | 2855793 - 2857769 | 73185.8 |
| two-component signal transduction histidine kinase | ALP24_03558 | Not Available | Positive | 2858050 - 2858840 | 29353.5 |
| dna-binding response regulator, luxr family | ALP24_05320 | Not Available | Positive | 2858837 - 2859439 | 21679.6 |
| hypothetical protein | ALP24_05656 | Not Available | Positive | 2859683 - 2860594 | 32288.8 |
| transketolase | ALP24_02033 | Not Available | Positive | 2861890 - 2863887 | 72557.6 |
| d-erythrose-4-phosphate dehydrogenase | ALP24_02034 | Not Available | Positive | 2864007 - 2865050 | 38384.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









