Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_00405 | Not Available | Negative | 2728911 - 2729204 | 10729.5 |
| penicillin-binding protein 1c | ALP24_00406 | Not Available | Positive | 2729300 - 2731648 | 86365.3 |
| dnaj domain-containing protein | ALP24_05387 | Not Available | Negative | 2731851 - 2732972 | 43872.1 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALP24_03759 | Not Available | Positive | 2733312 - 2733512 | 7218.04 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALP24_05388 | Not Available | Positive | 2733419 - 2734846 | 51748.6 |
| Trna-ala | Not Available | Not Available | Positive | 2735407 - 2735482 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2735571 - 2735642 | Not Available |
| lipoprotein | ALP24_03341 | Not Available | Positive | 2735819 - 2736247 | 15086.9 |
| hypothetical protein | ALP24_03429 | Not Available | Negative | 2736757 - 2738148 | 51149.5 |
| gamma-aminobutyrate:alpha-ketoglutarate aminotransferase | ALP24_03430 | Not Available | Negative | 2738148 - 2739419 | 45283.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









