Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s-oxidoreductase | ALP24_100019 | Not Available | Negative | 2556700 - 2557155 | 17080.7 |
| aspartate aminotransferase protein | ALP24_02764 | Not Available | Negative | 2557329 - 2558537 | 44835.2 |
| dihydroxy-acid dehydratase | ALP24_100077 | Not Available | Positive | 2559432 - 2560760 | 48420.3 |
| type vi secretion system rotein impg-2/vasa-2 | ALP24_02679 | Not Available | Negative | 2561076 - 2561903 | 31148.7 |
| type vi secretion system protein evpe | ALP24_100918 | Not Available | Negative | 2561896 - 2562309 | 15319.1 |
| type vi secretion system protein impc | ALP24_02680 | Not Available | Negative | 2562318 - 2563397 | 40783.3 |
| putative membrane-bound lytic murein transglycosylase d | ALP24_04540 | Not Available | Negative | 2563462 - 2563948 | 17896.3 |
| hydroxyacylglutathione hydrolase | ALP24_00681 | Not Available | Negative | 2564048 - 2564827 | 28568.7 |
| hypothetical protein | ALP24_00682 | Not Available | Positive | 2564909 - 2565670 | 28028.1 |
| ribonuclease h | ALP24_00683 | Not Available | Positive | 2565717 - 2566169 | 16792.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









