Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhle | ALP24_05102 | Not Available | Negative | 2547192 - 2547527 | 11484.0 |
| methylenetetrahydrofolate reductase | ALP24_02755 | Not Available | Negative | 2547863 - 2548708 | 31400.2 |
| adenosylhomocysteinase | ALP24_05103 | Not Available | Negative | 2548898 - 2550532 | 60190.6 |
| 4-hydroxybenzoyl-coa thioesterase | ALP24_02757 | Not Available | Positive | 2550662 - 2551057 | 14910.8 |
| hydroxypyruvate isomerase | ALP24_05104 | Not Available | Negative | 2551219 - 2552022 | 29591.1 |
| gluconate transporter protein | ALP24_02759 | Not Available | Negative | 2552027 - 2553484 | 50446.1 |
| putative s ii aldolase | ALP24_02760 | Not Available | Negative | 2553620 - 2554258 | 23256.0 |
| hopan1 protein | ALP24_02761 | Not Available | Negative | 2554258 - 2554983 | 24338.3 |
| hopan1 protein | ALP24_02762 | Not Available | Negative | 2554944 - 2555558 | 21380.6 |
| 3-hydroxyisobutyrate dehydrogenase | ALP24_02763 | Not Available | Negative | 2555569 - 2556474 | 30966.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









