Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine/lysine/ornithine abc-type transport system | ALP24_01635 | Not Available | Negative | 2450753 - 2451535 | 27915.4 |
| atp-dependent dna ligase | ALP24_01636 | Not Available | Negative | 2451879 - 2453609 | 63840.2 |
| dna ligase-associated exonuclease | ALP24_01637 | Not Available | Negative | 2453606 - 2454652 | 38237.9 |
| catalase-peroxidase | ALP24_02667 | Not Available | Negative | 2454863 - 2457133 | 82577.7 |
| gcn5-related n-acetyltransferase | ALP24_02668 | Not Available | Positive | 2457523 - 2457954 | 16363.8 |
| gcn5-related n-acetyltransferase | ALP24_02669 | Not Available | Positive | 2458315 - 2459373 | 40006.9 |
| ggdef domain-containing protein | ALP24_02670 | Not Available | Negative | 2459617 - 2460684 | 38962.5 |
| pseudouridine synthase | ALP24_05554 | Not Available | Positive | 2461502 - 2462457 | 35947.1 |
| hypothetical protein | ALP24_05257 | Not Available | Negative | 2462458 - 2463239 | 26826.2 |
| peptide methionine sulfoxide reductase msra | ALP24_02468 | Not Available | Negative | 2463898 - 2464404 | 19110.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









