Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy-associated tm helix | ALP24_03588 | Not Available | Positive | 2257887 - 2259020 | 41670.9 |
| glutathione s-transferase protein | ALP24_03589 | Not Available | Positive | 2259269 - 2259898 | 23638.2 |
| putative atp-dependent zinc protease | ALP24_03590 | Not Available | Negative | 2260060 - 2260563 | 18563.2 |
| putative acyltransferase | ALP24_05331 | Not Available | Positive | 2260679 - 2261162 | 18787.6 |
| hypothetical protein | ALP24_01570 | Not Available | Positive | 2261338 - 2261775 | 15616.8 |
| hypothetical protein | ALP24_01571 | Not Available | Negative | 2261832 - 2262407 | 21239.1 |
| putative prophage antirepressor, bro-domain protein | ALP24_01572 | Not Available | Positive | 2262870 - 2263415 | 21293.8 |
| short-chain acid dehydrogenase family oxidoreductase | ALP24_04795 | Not Available | Positive | 2263467 - 2264221 | 26652.9 |
| methyl-accepting chemotaxis protein | ALP24_03190 | Not Available | Positive | 2264222 - 2264635 | 14102.3 |
| group 1 glycosyl transferase | ALP24_100687 | Not Available | Negative | 2264699 - 2265811 | 41929.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









