Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease of the major facilitator superfamily | ALP24_100608 | Not Available | Negative | 2248097 - 2249557 | 52103.2 |
| hypothetical protein | ALP24_02913 | Not Available | Negative | 2249485 - 2250714 | 44272.8 |
| transcriptional regulator, gntr family | ALP24_101697 | Not Available | Negative | 2250749 - 2251450 | 25568.5 |
| hypothetical protein | ALP24_103263 | Not Available | Positive | 2251859 - 2252017 | 5727.21 |
| ggdef domain/eal domain-containing protein | ALP24_02914 | Not Available | Positive | 2252068 - 2254017 | 71609.9 |
| glycerol uptake facilitator protein | ALP24_05112 | Not Available | Negative | 2254256 - 2254712 | 16616.6 |
| cys-trna deacylase | ALP24_02787 | Not Available | Positive | 2254898 - 2255380 | 17364.0 |
| abc transporter:tobe | ALP24_02788 | Not Available | Negative | 2255389 - 2256033 | 23569.0 |
| rna polymerase sigma factor | ALP24_03586 | Not Available | Positive | 2256267 - 2256785 | 19455.7 |
| putative fe2+-dicitrate sensor, fecr/pupr family | ALP24_03587 | Not Available | Positive | 2256782 - 2257765 | 35820.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









