Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase hydrolase | ALP24_00154 | Not Available | Positive | 2067861 - 2068547 | 24503.6 |
| abc transporter atp-binding protein | ALP24_00155 | Not Available | Positive | 2068550 - 2070085 | 55799.2 |
| hypothetical protein | ALP24_00156 | Not Available | Positive | 2070759 - 2071154 | 14753.3 |
| gntr family transcriptional regulator | ALP24_100174 | Not Available | Positive | 2071151 - 2071837 | 27047.4 |
| hypothetical protein | ALP24_00157 | Not Available | Negative | 2071895 - 2072641 | 28005.1 |
| hypothetical protein | ALP24_04440 | Not Available | Negative | 2072628 - 2072897 | 9399.27 |
| sensory box/ggdef domain/eal domain protein | ALP24_102410 | Not Available | Positive | 2074699 - 2075703 | 37163.6 |
| sensory box domain protein | ALP24_00158 | Not Available | Positive | 2076022 - 2077278 | 45645.3 |
| putative dipeptidase, m20 family | ALP24_00159 | Not Available | Negative | 2077349 - 2079106 | 63100.4 |
| hypothetical protein | ALP24_00160 | Not Available | Positive | 2079529 - 2080188 | 25015.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









