Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snoal-like domain protein | ALP24_00144 | Not Available | Negative | 2057642 - 2058058 | 15558.5 |
| sugar transporter protein | ALP24_00145 | Not Available | Positive | 2058438 - 2059859 | 50917.5 |
| homoserine/lysine/threonine efflux protein, lyse/ygga family | ALP24_00146 | Not Available | Negative | 2059908 - 2060618 | 25103.4 |
| transcriptional regulator, asnc family | ALP24_00147 | Not Available | Positive | 2060701 - 2061180 | 18039.1 |
| hypothetical protein | ALP24_00148 | Not Available | Positive | 2061242 - 2061622 | 14362.1 |
| amidase | ALP24_00149 | Not Available | Positive | 2061833 - 2063650 | 64477.1 |
| twin-arginine translocation pathway signal | ALP24_00150 | Not Available | Positive | 2063666 - 2064775 | 39565.6 |
| abc transporter permease | ALP24_00151 | Not Available | Positive | 2064785 - 2065096 | 10844.5 |
| hypothetical protein | ALP24_00152 | Not Available | Positive | 2065889 - 2066734 | 28992.2 |
| formamidase | ALP24_00153 | Not Available | Positive | 2066840 - 2067856 | 37014.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









