Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas protein | ALP24_05242 | Not Available | Negative | 152810 - 154030 | 45279.6 |
| alpha/beta hydrolase fold protein | ALP24_03250 | Not Available | Negative | 153987 - 154820 | 30665.2 |
| cytosine deaminase | ALP24_03251 | Not Available | Negative | 155018 - 155455 | 15786.9 |
| hypothetical protein | ALP24_03252 | Not Available | Negative | 155487 - 155987 | 18178.5 |
| substrate-binding region of abc-type glycine betaine transport system | ALP24_03253 | Not Available | Negative | 156121 - 157140 | 36737.9 |
| gcn5-related n-acetyltransferase | ALP24_03254 | Not Available | Positive | 157255 - 157665 | 15246.6 |
| peptide deformylase | ALP24_03255 | Not Available | Negative | 157690 - 158229 | 20067.3 |
| yihy/virulence factor brkb family inner membrane protein | ALP24_05244 | Not Available | Negative | 158280 - 159353 | 39264.5 |
| hypothetical protein | ALP24_05245 | Not Available | Positive | 159437 - 160264 | 30403.2 |
| putative membrane protein | ALP24_100373 | Not Available | Negative | 160354 - 160833 | 17302.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









