Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| binding-protein dependent transport system inner membrane protein | ALP24_05392 | Not Available | Negative | 1984718 - 1985516 | 27911.8 |
| extracellular solute-binding protein | ALP24_03770 | Not Available | Negative | 1986405 - 1987640 | 45151.3 |
| extracellular solute-binding protein | ALP24_03771 | Not Available | Negative | 1987695 - 1988134 | 16792.0 |
| his/glu/gln/arg/opine family amino acid abc-type transport system | ALP24_03772 | Not Available | Positive | 1988592 - 1989257 | 24020.4 |
| his/glu/gln/arg/opine family amino acid abc-type transport system | ALP24_05393 | Not Available | Positive | 1989906 - 1990075 | 5818.05 |
| rulb protein | ALP24_05207 | Not Available | Negative | 1990076 - 1990336 | 9691.93 |
| type iii chaperone protein shcf | ALP24_03124 | Not Available | Positive | 1990506 - 1990898 | 15214.4 |
| orf2-like protein | ALP24_100983 | Not Available | Positive | 1990969 - 1991583 | 21918.4 |
| thioesterase super protein | ALP24_03226 | Not Available | Positive | 1992825 - 1993286 | 17549.9 |
| pp_01944 | ALP24_03227 | Not Available | Positive | 1993316 - 1994281 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









