Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | ALP24_04268 | Not Available | Positive | 1976637 - 1977047 | 13811.9 |
| 3-hydroxyisobutyrate dehydrogenase protein | ALP24_103246 | Not Available | Positive | 1976855 - 1977526 | 23543.1 |
| aldehyde dehydrogenase protein | ALP24_04269 | Not Available | Positive | 1977530 - 1979047 | 54262.7 |
| peptidase, m20/m25/m40 family | ALP24_05611 | Not Available | Positive | 1979052 - 1979597 | 19398.1 |
| peptidase m20d, amidohydrolase | ALP24_04270 | Not Available | Positive | 1979467 - 1980309 | 30729.2 |
| serine dehydratase | ALP24_05612 | Not Available | Negative | 1980346 - 1981725 | 49444.5 |
| lysr family transcriptional activator | ALP24_04272 | Not Available | Positive | 1981852 - 1982763 | 33975.0 |
| hypothetical protein | ALP24_04273 | Not Available | Negative | 1982789 - 1984162 | 47868.9 |
| hypothetical protein | ALP24_102166 | Not Available | Positive | 1984116 - 1984340 | 8477.31 |
| transposase protein | ALP24_05350 | Not Available | Negative | 1984482 - 1984717 | 9140.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









