Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| binding-protein dependent transport system inner membrane protein | ALP24_02301 | Not Available | Negative | 1946265 - 1946627 | 13138.6 |
| binding-protein dependent transport system inner membrane protein | ALP24_02302 | Not Available | Negative | 1946648 - 1947046 | 13965.4 |
| extracellular solute-binding protein | ALP24_02303 | Not Available | Negative | 1947141 - 1947929 | 28725.0 |
| sulfate-binding protein | ALP24_02304 | Not Available | Negative | 1947942 - 1948151 | 7711.97 |
| hypothetical protein | ALP24_102079 | Not Available | Positive | 1948155 - 1948283 | 4709.96 |
| hypothetical protein | ALP24_02305 | Not Available | Negative | 1948304 - 1948483 | 6649.94 |
| sensory box/ggdef domain/eal domain protein | ALP24_02306 | Not Available | Negative | 1948678 - 1950597 | 70304.1 |
| fatty acid desaturase | ALP24_02307 | Not Available | Positive | 1950667 - 1951935 | 48253.5 |
| sensory box/diguanylate cye domain protein | ALP24_02308 | Not Available | Positive | 1952063 - 1952971 | 33153.0 |
| bacteriocin immunity protein | ALP24_101398 | Not Available | Negative | 1953812 - 1954297 | 18461.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









