Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | ALP24_01426 | Not Available | Positive | 1857470 - 1857781 | 10883.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | ALP24_01427 | Not Available | Positive | 1857766 - 1858188 | 14623.8 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | ALP24_101935 | Not Available | Positive | 1858164 - 1859144 | 33689.1 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | ALP24_01428 | Not Available | Positive | 1859144 - 1860226 | 39486.6 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | ALP24_01429 | Not Available | Positive | 1860232 - 1861578 | 48220.9 |
| lipid ii flippase ftsw | ALP24_01430 | Not Available | Positive | 1861575 - 1862789 | 44001.9 |
| udp-n-acetylglucosamine--n-acetylmuramyl- pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | ALP24_01431 | Not Available | Positive | 1862779 - 1863372 | 20540.2 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | ALP24_01432 | Not Available | Positive | 1863556 - 1863843 | 9984.0 |
| udp-n-acetylmuramate--l-alanine ligase | ALP24_100824 | Not Available | Positive | 1863836 - 1865296 | 52691.6 |
| d-alanine--d-alanine ligase | ALP24_01433 | Not Available | Positive | 1865293 - 1866252 | 33914.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









