Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl/phenylalanyl-trna--protein transferase | ALP24_03565 | Not Available | Positive | 1826479 - 1827168 | 25954.7 |
| putative arginyl-trna--protein transferase | ALP24_03566 | Not Available | Positive | 1827217 - 1827924 | 27825.3 |
| translation initiation factor if-1 | ALP24_03567 | Not Available | Positive | 1828026 - 1828244 | 8303.06 |
| atp-dependent clp protease, atp-binding subunit clpa | ALP24_03568 | Not Available | Negative | 1828339 - 1830612 | 83476.8 |
| atp-dependent clp protease adapter protein clps | ALP24_03569 | Not Available | Negative | 1830643 - 1831005 | 13573.2 |
| cold-shock protein, dna-binding | ALP24_03570 | Not Available | Positive | 1831230 - 1831505 | 10115.0 |
| rnd efflux transporter | ALP24_102700 | Not Available | Positive | 1833846 - 1834949 | 39769.9 |
| two-component dna-binding heavy metal response regulator | ALP24_03571 | Not Available | Positive | 1834960 - 1835649 | 25341.9 |
| heavy metal sensor kinase | ALP24_05324 | Not Available | Positive | 1835444 - 1836655 | 45047.3 |
| hypothetical protein | ALP24_03334 | Not Available | Positive | 1836804 - 1837772 | 33632.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









