Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-specific channel-forming protein tsx | ALP24_04864 | Not Available | Positive | 1741678 - 1742637 | 35461.9 |
| purine nucleoside permease | ALP24_01889 | Not Available | Positive | 1742664 - 1743695 | 37769.0 |
| putative membrane protein | ALP24_03217 | Not Available | Negative | 1743985 - 1744404 | 15576.9 |
| parb family partitioning protein | ALP24_03218 | Not Available | Negative | 1744455 - 1745459 | 36352.8 |
| paraa family atpase | ALP24_03219 | Not Available | Negative | 1745577 - 1746704 | 41520.0 |
| isppu14, transposase orf1 | ALP24_102890 | Not Available | Negative | 1746787 - 1747146 | 13092.0 |
| regulatory protein, lysr:lysr, substrate-binding | ALP24_05230 | Not Available | Negative | 1747427 - 1747992 | 21431.1 |
| hypothetical protein | ALP24_04846 | Not Available | Negative | 1748218 - 1754160 | 218749.0 |
| hypothetical protein | ALP24_01800 | Not Available | Positive | 1754220 - 1754783 | 18523.1 |
| dna ligase | ALP24_04312 | Not Available | Positive | 1755554 - 1755822 | 9100.03 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









