Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ampe | ALP24_01879 | Not Available | Positive | 1729980 - 1730816 | 30674.3 |
| tatd family deoxyribonuclease | ALP24_01880 | Not Available | Negative | 1730852 - 1731646 | 29887.8 |
| dna-binding transcriptional regulator frur | ALP24_01881 | Not Available | Negative | 1731649 - 1732644 | 36547.0 |
| fad-dependent dehydrogenase | ALP24_04861 | Not Available | Positive | 1732966 - 1734765 | 64135.2 |
| outer membrane lipoprotein slyb | ALP24_01883 | Not Available | Negative | 1734866 - 1735330 | 15754.9 |
| pyridoxine/pyridoxamine 5'-phosphate oxidase | ALP24_01884 | Not Available | Negative | 1735478 - 1736125 | 24930.2 |
| ompa family outer membrane protein/peptidoglycan-associated protein | ALP24_01885 | Not Available | Negative | 1736200 - 1737363 | 40152.6 |
| beta-lactamase | ALP24_01886 | Not Available | Negative | 1737517 - 1738689 | 42053.1 |
| atp-dependent helicase ding/rad3 | ALP24_01887 | Not Available | Negative | 1738775 - 1740925 | 78867.3 |
| putative integral membrane protein, copd superfamily | ALP24_01888 | Not Available | Positive | 1741033 - 1741497 | 17013.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









