Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel/dipeptide/oligopeptide abc-type transport system | ALP24_00890 | Not Available | Positive | 1619796 - 1620857 | 38687.0 |
| nickel/dipeptide/oligopeptide abc-type transport system | ALP24_00891 | Not Available | Positive | 1620854 - 1621879 | 38099.6 |
| abc transporter | ALP24_00892 | Not Available | Positive | 1621881 - 1622492 | 22111.1 |
| abc transporter | ALP24_00893 | Not Available | Positive | 1622495 - 1623466 | 35971.5 |
| type iv pilus retraction atpase pilt | ALP24_00894 | Not Available | Negative | 1623517 - 1624686 | 42636.3 |
| hypothetical protein | ALP24_103198 | Not Available | Negative | 1624689 - 1624811 | 4595.83 |
| peptidyl-prolyl cis-trans isomerase c | ALP24_00895 | Not Available | Positive | 1624810 - 1625085 | 10111.5 |
| phosphoglucomutase | ALP24_04598 | Not Available | Negative | 1625161 - 1626894 | 62364.8 |
| dead/deah box helicase | ALP24_04601 | Not Available | Negative | 1626971 - 1629373 | 89280.0 |
| regulatory protein, gntr | ALP24_00898 | Not Available | Negative | 1629404 - 1630810 | 52264.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









