Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, m20/m25/m40 family | ALP24_04434 | Not Available | Positive | 1605294 - 1607006 | 60730.0 |
| putative glutamate carboxypeptidase, m20 peptidase family | ALP24_04435 | Not Available | Positive | 1607007 - 1607566 | 19001.7 |
| ispsy13, transposase orfa | ALP24_03742 | Not Available | Negative | 1607751 - 1607927 | 6820.27 |
| Trna-arg | Not Available | Not Available | Positive | 1608177 - 1608248 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1608668 - 1608736 | Not Available |
| hypothetical protein | ALP24_03743 | Not Available | Positive | 1609054 - 1609293 | 8603.33 |
| hypothetical protein | ALP24_03744 | Not Available | Positive | 1609330 - 1609515 | 6481.3 |
| arc-like dna binding domain protein | ALP24_03745 | Not Available | Positive | 1609953 - 1610270 | 12047.2 |
| exodeoxyribonuclease v, gamma subunit | ALP24_04429 | Not Available | Positive | 1610417 - 1613941 | 131916.0 |
| extracellular solute-binding protein | ALP24_00889 | Not Available | Positive | 1618863 - 1619795 | 35343.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









