Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | ALP24_01869 | Not Available | Negative | 1402517 - 1403530 | 37693.9 |
| degt/dnrj/eryc1/strs aminotransferase | ALP24_01870 | Not Available | Negative | 1403527 - 1404675 | 41677.0 |
| hypothetical protein | ALP24_04857 | Not Available | Positive | 1405619 - 1406029 | 14881.3 |
| pepsy-associated tm helix protein | ALP24_01871 | Not Available | Positive | 1406138 - 1407532 | 50598.3 |
| carbamate kinase | ALP24_04859 | Not Available | Negative | 1407750 - 1408610 | 30447.9 |
| ornithine carbamoyltransferase | ALP24_01872 | Not Available | Negative | 1408705 - 1409715 | 37656.2 |
| arginine deiminase | ALP24_01873 | Not Available | Negative | 1409783 - 1410355 | 20625.0 |
| arginine deiminase | ALP24_01874 | Not Available | Negative | 1410360 - 1411043 | 25452.5 |
| amino acid apc transporter | ALP24_100743 | Not Available | Negative | 1411079 - 1412506 | 51255.2 |
| methyl-accepting chemotaxis protein | ALP24_01875 | Not Available | Positive | 1412987 - 1415158 | 77345.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









