Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s45, penicillin amidase | ALP24_03872 | Not Available | Negative | 1368501 - 1369190 | 24566.0 |
| 3-oxo-c12-homoserine lactone acylase pvdq | ALP24_03873 | Not Available | Negative | 1369129 - 1370763 | 57853.1 |
| secretion protein hlyd | ALP24_05430 | Not Available | Positive | 1370950 - 1371168 | 7863.7 |
| secretion protein hlyd | ALP24_05431 | Not Available | Positive | 1371114 - 1372121 | 36139.9 |
| pyoverdine rnd-type export system, permease/atp-binding fusion protein pvdt | ALP24_05432 | Not Available | Positive | 1372296 - 1372485 | 6778.9 |
| para-like chromosome partitioning protein | ALP24_03619 | Not Available | Positive | 1372486 - 1373126 | 23457.5 |
| hypothetical protein | ALP24_05345 | Not Available | Positive | 1373172 - 1373927 | 28102.6 |
| putative uncharacterized protein pph02 | ALP24_03620 | Not Available | Positive | 1373924 - 1374625 | 25788.6 |
| replicative dna helicase | ALP24_03621 | Not Available | Positive | 1374625 - 1375971 | 49352.9 |
| hypothetical protein | ALP24_05346 | Not Available | Positive | 1376294 - 1376725 | 15729.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









