Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyldiaminopimelate transaminase | ALP24_01008 | Not Available | Positive | 1262752 - 1263945 | 43715.5 |
| zinc-dependent metalloprotease | ALP24_01009 | Not Available | Positive | 1264074 - 1264922 | 31286.9 |
| hypothetical protein | ALP24_01010 | Not Available | Negative | 1265016 - 1265303 | 11260.7 |
| hypothetical protein | ALP24_01011 | Not Available | Positive | 1265479 - 1265826 | 13217.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | ALP24_100002 | Not Available | Positive | 1265850 - 1266908 | 37084.8 |
| aminotransferase, s v | ALP24_01012 | Not Available | Positive | 1266968 - 1268173 | 43127.6 |
| thif protein | ALP24_01013 | Not Available | Negative | 1268568 - 1269404 | 29913.2 |
| glycosyl transferase, group 2 protein | ALP24_100775 | Not Available | Positive | 1269577 - 1272195 | 98438.0 |
| succinyl-diaminopimelate desuccinylase | ALP24_01014 | Not Available | Positive | 1272295 - 1273446 | 41062.7 |
| rrna -methyltransferase | ALP24_01015 | Not Available | Positive | 1273446 - 1274255 | 30187.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









