Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALP24_00003 | Not Available | Positive | 1184278 - 1185180 | 33297.1 |
| dna polymerase | ALP24_04960 | Not Available | Negative | 1185458 - 1186315 | 32527.8 |
| cbs domain-containing protein | ALP24_02218 | Not Available | Positive | 1186538 - 1186978 | 15853.5 |
| hypothetical protein | ALP24_02219 | Not Available | Negative | 1187032 - 1187577 | 19154.4 |
| acetylornithine aminotransferase | ALP24_02220 | Not Available | Negative | 1187702 - 1188904 | 42879.1 |
| transcriptional regulator, lysr protein | ALP24_100628 | Not Available | Positive | 1188960 - 1189907 | 35055.3 |
| histidine kinase, hamp region: chemotaxis sensory transducer | ALP24_04962 | Not Available | Negative | 1190001 - 1191829 | 65836.1 |
| gaf domain protein | ALP24_02223 | Not Available | Positive | 1192022 - 1192549 | 19169.0 |
| hypothetical protein | ALP24_02224 | Not Available | Negative | 1192557 - 1192808 | 8955.88 |
| taurine catabolism dioxygenase taud/tfda | ALP24_04964 | Not Available | Negative | 1192901 - 1193953 | 38763.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









