Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| soluble pyridine nucleotide transhydrogenase | ALP24_04006 | Not Available | Positive | 56319 - 57713 | 50723.4 |
| glycerophosphoryl diester phosphodiesterase | ALP24_05471 | Not Available | Negative | 57756 - 58478 | 26862.2 |
| pilz domain protein | ALP24_04008 | Not Available | Negative | 58523 - 59110 | 21666.8 |
| lipoprotein releasing system, transmembrane protein | ALP24_05472 | Not Available | Positive | 59195 - 59941 | 27160.5 |
| putative relaxase | ALP24_05518 | Not Available | Negative | 59942 - 60248 | 11201.5 |
| hypothetical protein | ALP24_00407 | Not Available | Positive | 60251 - 61225 | 35644.7 |
| type iii effector hopah2 | ALP24_101942 | Not Available | Negative | 61336 - 61608 | 9667.31 |
| hopah2 protein | ALP24_04491 | Not Available | Negative | 61535 - 62479 | 34129.1 |
| d-isomer specific 2-hydroxyacid dehydrogenase | ALP24_100431 | Not Available | Negative | 62900 - 63856 | 34728.8 |
| hypothetical protein | ALP24_00408 | Not Available | Negative | 63899 - 64552 | 23984.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









