Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. aptata strain ICMP 11935 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Solanum lycopersicum |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1235513 bp
Thymine Count
1233660 bp
Guanine Count
1754486 bp
Cytosine Count
1753086 bp
Genome Length
6044375 bp
Protein-coding Genes
5681 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type vi secretion system effector, vgrg family | ALP24_04417 | Not Available | Negative | 1029698 - 1032277 | 94206.9 |
| hypothetical protein | ALP24_02478 | Not Available | Negative | 1033292 - 1033744 | 17164.8 |
| mutt/nudix protein | ALP24_02479 | Not Available | Negative | 1033735 - 1034382 | 24161.8 |
| hypothetical protein | ALP24_102056 | Not Available | Negative | 1034463 - 1034645 | 6579.16 |
| putative lipoprotein | ALP24_05023 | Not Available | Positive | 1034560 - 1035306 | 27496.3 |
| cytosine/purine uracil thiaminee allantoin permease | ALP24_02480 | Not Available | Negative | 1035329 - 1036564 | 43005.4 |
| transposase tn3 | ALP24_04066 | Not Available | Negative | 1036812 - 1037144 | 11674.2 |
| hypothetical protein | ALP24_05512 | Not Available | Positive | 1037301 - 1037546 | 8815.75 |
| fusaric acid resistance protein | ALP24_00564 | Not Available | Positive | 1038560 - 1039108 | 20186.0 |
| oxidoreductase, short chain dehydrogenase/reductase family | ALP24_100026 | Not Available | Negative | 1039179 - 1039997 | 28788.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.









