Pseudomonas syringae pv. aptata strain ICMP 11935

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. aptata strain ICMP 11935 is a Gram-negative, rod-shaped bacterium that exists as single cells and is classified as a heterotrophic aerobe. This strain is capable of utilizing a variety of organic compounds as energy sources, which allows it to thrive in diverse habitats. Its aerobic nature indicates that it requires oxygen for growth, a characteristic that often influences its ecological distribution and interactions within various environments. The ability of Pseudomonas syringae pv. aptata strain ICMP 11935 to adapt to multiple habitats suggests a versatile metabolic capacity, which may include the degradation of complex organic materials. This adaptability is indicative of the broader ecological role that members of the Pseudomonas genus often play, including involvement in nutrient cycling and potential bioremediation processes. Understanding the ecological adaptations and metabolic pathways of this strain could provide insights into its interactions with other microorganisms in its native habitats, as well as its potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. aptata strain ICMP 11935
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. aptata strain ICMP 11935

Accession NumberRBUF00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5681 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+3032759 - 3032770Not Available
AttlNot AvailableNot Available+3043139 - 3043150Not Available
Hypothetical proteinALP24_00844Not Available-3045413 - 304649840930.8
hypothetical proteinALP24_00845Not Available+3046901 - 304806142081.8
IntegraseALP24_00846Not Available-3048718 - 304986643938.7
hypothetical proteinALP24_102468Not Available-3050066 - 305033510099.5
Hypothetical proteinALP24_00847Not Available-3050408 - 305121729211.8
Hypothetical proteinALP24_00848Not Available-3051261 - 305161112429.7
ExcisionaseALP24_00849Not Available-3051661 - 30519038994.85
hypothetical proteinALP24_100972Not Available-3051900 - 305227413077.9

Displaying genes 1 – 10 of 5740 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

166 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da

Displaying 1–10 of 166 metabolites