Pseudomonas syringae pv. avii strain ICMP 14479

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. avii strain ICMP 14479 is a gram-negative, mesophilic bacterium characterized by its rod shape and single-cell arrangement. This strain is classified as a heterotroph, indicating that it derives its energy from organic compounds. It is an aerobic organism, requiring oxygen for its metabolic processes. P. syringae pv. avii is motile, possessing flagella that facilitate movement in its environment. It has a unique cellular structure with two membranes and a single replicon, which is typical of gram-negative bacteria. The strain is noted for its ability to thrive in multiple habitats, showcasing its ecological versatility and adaptability. The free-living biotic relationship of this strain suggests that it can exist independently in various environments, possibly contributing to nutrient cycling and interactions within microbial communities. Understanding the ecological role of P. syringae pv. avii could provide insights into its impact on plant health and its potential as a biocontrol agent in agricultural settings. Access to the genomic information, represented by the accession number RBUA00000000.1, can further aid in the study of its genetic traits and mechanisms of action.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. avii strain ICMP 14479

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. avii strain ICMP 14479
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. avii strain ICMP 14479

Gene Summary

Adenine Count

1462844 bp

Thymine Count

1461989 bp

Guanine Count

2162962 bp

Cytosine Count

2138869 bp

Genome Length

7334361 bp

Protein-coding Genes

6766 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinALP29_200656Not AvailableNegative1778135 - 177863218563.1
Trna-ileNot AvailableNot AvailablePositive1778718 - 1778794Not Available
Trna-alaNot AvailableNot AvailablePositive1778805 - 1778880Not Available
hypothetical proteinALP29_200255Not AvailablePositive1778980 - 17791566216.45
hypothetical proteinALP29_201790Not AvailableNegative1779358 - 177966911261.5
hypothetical proteinALP29_200545Not AvailablePositive1779813 - 17800498174.21
hypothetical proteinALP29_201144Not AvailableNegative1779959 - 178030012319.2
hypothetical proteinALP29_02127Not AvailableNegative1780355 - 17806299138.56
hypothetical proteinALP29_200070Not AvailableNegative1780657 - 178096810963.8
hypothetical proteinALP29_201803Not AvailableNegative1781006 - 178155120042.6

Displaying genes 1811 – 1820 of 6932 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.