Pseudomonas avellanae strain ICMP 9749

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas avellanae strain ICMP 9749 is a bacterium characterized by a single replicon. This strain has a specific host association with Corylus avellana, commonly known as the hazelnut tree. Notably, Pseudomonas avellanae is implicated in decline disease, which affects the health of its host plant. The strain is cataloged under the accession number RBTX00000000.1, indicating its availability for further research and study. Understanding the relationship between Pseudomonas avellanae and Corylus avellana is crucial, especially in the context of agricultural health. The decline disease associated with this bacterium can have significant repercussions for hazelnut production, potentially impacting yield and quality. This interaction exemplifies the importance of microbial pathogens in plant health and agricultural ecosystems. The study of Pseudomonas avellanae strain ICMP 9749 can provide insights into disease management strategies for hazelnut cultivation and enhance our understanding of plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas avellanae
Strainstrain ICMP 9749

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas avellanae strain ICMP 9749
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Corylus avellana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas avellanae strain ICMP 9749 PavICMP9749_Contig_557,

Gene Summary

Adenine Count

1243023 bp

Thymine Count

1241479 bp

Guanine Count

1757587 bp

Cytosine Count

1748298 bp

Genome Length

6044674 bp

Protein-coding Genes

5174 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionyl-trna formyltransferaseALP32_02681Not AvailableNegative3510521 - 351148934688.2
peptide deformylaseALP32_02682Not AvailableNegative3511526 - 351203219258.4
peptidoglycan-binding lysmALP32_101777Not AvailablePositive3512128 - 351318338819.6
putative dna processing protein dpraALP32_103072Not AvailablePositive3513307 - 351389721478.9
putative dna processing protein dpraALP32_101769Not AvailablePositive3513779 - 351445623069.7
threonylcarbamoyl-amp synthaseALP32_02683Not AvailablePositive3514495 - 351505220537.7
zinc-containing alcohol dehydrogenase superfamilyALP32_100832Not AvailableNegative3515066 - 351607035222.2
oxygen-dependent coproporphyrinogen-iii oxidaseALP32_02684Not AvailablePositive3516666 - 351758034517.3
shikimate dehydrogenaseALP32_02685Not AvailablePositive3517580 - 351840429368.0
tannaseALP32_102087Not AvailableNegative3518469 - 351896018422.8

Displaying genes 3131 – 3140 of 5260 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Decline diseaseCausesPMC9104263

Displaying health effects 1 – 1 of 1 in total