Pseudomonas avellanae strain ICMP 9749

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas avellanae strain ICMP 9749 is a bacterium characterized by a single replicon. This strain has a specific host association with Corylus avellana, commonly known as the hazelnut tree. Notably, Pseudomonas avellanae is implicated in decline disease, which affects the health of its host plant. The strain is cataloged under the accession number RBTX00000000.1, indicating its availability for further research and study. Understanding the relationship between Pseudomonas avellanae and Corylus avellana is crucial, especially in the context of agricultural health. The decline disease associated with this bacterium can have significant repercussions for hazelnut production, potentially impacting yield and quality. This interaction exemplifies the importance of microbial pathogens in plant health and agricultural ecosystems. The study of Pseudomonas avellanae strain ICMP 9749 can provide insights into disease management strategies for hazelnut cultivation and enhance our understanding of plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas avellanae
Strainstrain ICMP 9749

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas avellanae strain ICMP 9749
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Corylus avellana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas avellanae strain ICMP 9749 PavICMP9749_Contig_557,

Gene Summary

Adenine Count

1243023 bp

Thymine Count

1241479 bp

Guanine Count

1757587 bp

Cytosine Count

1748298 bp

Genome Length

6044674 bp

Protein-coding Genes

5174 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
group 2 family glycosyl transferaseALP32_01969Not AvailablePositive2805514 - 280644935111.9
low molecular weight phosphotyrosine protein phosphataseALP32_01970Not AvailablePositive2806439 - 280690617315.9
tyrosine-protein kinaseALP32_01971Not AvailablePositive2806907 - 280915383296.4
transcription antitermination protein rfahALP32_01972Not AvailablePositive2809205 - 280971719581.7
glycoside hydrolase proteinALP32_101363Not AvailablePositive2810804 - 281204246291.5
group 1 family glycosyl transferaseALP32_01973Not AvailablePositive2812118 - 281322741299.8
group 1 family glycosyl transferaseALP32_01974Not AvailablePositive2813298 - 281452745086.5
capsular polysaccharide biosynthesis proteinALP32_01975Not AvailablePositive2814624 - 281594950381.8
capsular polysaccharide biosynthesis proteinALP32_01976Not AvailablePositive2816055 - 281714339255.9
fmn reductase, proteinh-dependentALP32_01977Not AvailablePositive2817392 - 281797321045.4

Displaying genes 2501 – 2510 of 5260 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Decline diseaseCausesPMC9104263

Displaying health effects 1 – 1 of 1 in total