Pseudomonas avellanae strain ICMP 9749

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas avellanae strain ICMP 9749 is a bacterium characterized by a single replicon. This strain has a specific host association with Corylus avellana, commonly known as the hazelnut tree. Notably, Pseudomonas avellanae is implicated in decline disease, which affects the health of its host plant. The strain is cataloged under the accession number RBTX00000000.1, indicating its availability for further research and study. Understanding the relationship between Pseudomonas avellanae and Corylus avellana is crucial, especially in the context of agricultural health. The decline disease associated with this bacterium can have significant repercussions for hazelnut production, potentially impacting yield and quality. This interaction exemplifies the importance of microbial pathogens in plant health and agricultural ecosystems. The study of Pseudomonas avellanae strain ICMP 9749 can provide insights into disease management strategies for hazelnut cultivation and enhance our understanding of plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas avellanae
Strainstrain ICMP 9749

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas avellanae strain ICMP 9749
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Corylus avellana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas avellanae strain ICMP 9749 PavICMP9749_Contig_557,

Gene Summary

Adenine Count

1243023 bp

Thymine Count

1241479 bp

Guanine Count

1757587 bp

Cytosine Count

1748298 bp

Genome Length

6044674 bp

Protein-coding Genes

5174 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseALP32_00361Not AvailablePositive2628667 - 263003747253.5
phospho-n-acetylmuramoyl-pentapeptide- transferaseALP32_00362Not AvailablePositive2630037 - 263111939486.6
udp-n-acetylmuramoylalanine--d-glutamate ligaseALP32_00363Not AvailablePositive2631125 - 263247148073.6
lipid ii flippase ftswALP32_00364Not AvailablePositive2632468 - 263368243970.9
udp-n-acetylglucosamine--n-acetylmuramyl- pyrophosphoryl-undecaprenol n-acetylglucosamine transferaseALP32_00365Not AvailablePositive2633672 - 263474237814.2
udp-n-acetylmuramate--l-alanine ligaseALP32_00366Not AvailablePositive2634735 - 263619552575.5
d-alanine--d-alanine ligaseALP32_00367Not AvailablePositive2636192 - 263715134127.9
cell division protein ftsqALP32_00368Not AvailablePositive2637155 - 263802432717.7
cell division protein ftsaALP32_00369Not AvailablePositive2638039 - 263929544521.7
cell division protein ftszALP32_103704Not AvailablePositive2639383 - 264057041568.2

Displaying genes 2331 – 2340 of 5260 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Decline diseaseCausesPMC9104263

Displaying health effects 1 – 1 of 1 in total