Pseudomonas avellanae strain ICMP 9749

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas avellanae strain ICMP 9749 is a bacterium characterized by a single replicon. This strain has a specific host association with Corylus avellana, commonly known as the hazelnut tree. Notably, Pseudomonas avellanae is implicated in decline disease, which affects the health of its host plant. The strain is cataloged under the accession number RBTX00000000.1, indicating its availability for further research and study. Understanding the relationship between Pseudomonas avellanae and Corylus avellana is crucial, especially in the context of agricultural health. The decline disease associated with this bacterium can have significant repercussions for hazelnut production, potentially impacting yield and quality. This interaction exemplifies the importance of microbial pathogens in plant health and agricultural ecosystems. The study of Pseudomonas avellanae strain ICMP 9749 can provide insights into disease management strategies for hazelnut cultivation and enhance our understanding of plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas avellanae
Strainstrain ICMP 9749

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas avellanae strain ICMP 9749
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Corylus avellana
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas avellanae strain ICMP 9749 PavICMP9749_Contig_557,

Gene Summary

Adenine Count

1243023 bp

Thymine Count

1241479 bp

Guanine Count

1757587 bp

Cytosine Count

1748298 bp

Genome Length

6044674 bp

Protein-coding Genes

5174 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tabtoxin resistance proteinALP32_03258Not AvailableNegative2032918 - 203345119508.4
phosphinothricin n-acetyltransferaseALP32_03259Not AvailableNegative2033462 - 203401020034.9
urease subunit gammaALP32_03260Not AvailableNegative2034015 - 203431710990.4
urease accessory protein uredALP32_04461Not AvailableNegative2034405 - 203515127320.8
urea abc transporter, atpase protein urteALP32_100057Not AvailableNegative2035317 - 203606027182.5
branched-chain amino acid abc transporter, atp-binding proteinALP32_03261Not AvailableNegative2036126 - 203698630969.3
branched-chain amino acid abc transporter permeaseALP32_03262Not AvailableNegative2036983 - 203806238766.5
branched-chain amino acid abc transporter permeaseALP32_03263Not AvailableNegative2038062 - 203965156199.4
branched-chain amino acid abc transporter substrate-binding proteinALP32_04462Not AvailableNegative2039895 - 204122048562.1
hypothetical proteinALP32_03265Not AvailableNegative2041406 - 2044834128558.0

Displaying genes 1811 – 1820 of 5260 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Decline diseaseCausesPMC9104263

Displaying health effects 1 – 1 of 1 in total