Pseudomonas syringae pv. coriandricola strain ICMP 9829

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. coriandricola strain ICMP 9829 is characterized by having a single replicon. This trait is significant as it indicates a streamlined genomic structure, which can influence its metabolic capabilities and adaptability. The strain is documented under the accession number RBTT00000000.1, which provides a reference for researchers seeking to study its genetic makeup or related characteristics. As a member of the Pseudomonas syringae species complex, this strain is known for its role in plant pathology, particularly affecting coriander plants. The understanding of its genomic features, such as the single replicon, may offer insights into how it interacts with plant hosts, possibly affecting virulence and pathogenicity. One biological insight into Pseudomonas syringae pv. coriandricola is its potential impact on agricultural practices, particularly within coriander cultivation. The strain's pathogenic nature suggests that it may pose a threat to crop yields, thereby affecting food supply chains and economic stability for farmers growing coriander. Understanding the genetic basis of this strain could facilitate the development of targeted management strategies to mitigate its impact, enhancing crop resilience and sustainability in agricultural ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. coriandricola strain ICMP 9829
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. coriandricola strain ICMP 9829

Gene Summary

Adenine Count

1333172 bp

Thymine Count

1327194 bp

Guanine Count

1864043 bp

Cytosine Count

1861664 bp

Genome Length

6420155 bp

Protein-coding Genes

5797 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerol kinaseALP36_01085Not AvailablePositive5382016 - 538352155838.2
glycerol-3-phosphate regulon repressorALP36_01086Not AvailablePositive5383632 - 538438727739.5
glycerol-3-phosphate dehydrogenaseALP36_01087Not AvailablePositive5384979 - 538651757124.3
amino acid abc transporter, periplasmic amino acid-binding proteinALP36_01088Not AvailablePositive5386873 - 538779933508.3
amino acid abc transporter, permease proteinALP36_01089Not AvailablePositive5387930 - 538867627603.3
amino acid abc transporter, permease proteinALP36_01090Not AvailablePositive5388676 - 538934124198.6
sensor histidine kinaseALP36_01091Not AvailablePositive5390131 - 539206271341.5
sigma-54 dependent transcriptional regulator/response regulatorALP36_01092Not AvailablePositive5392073 - 539340148878.5
2-hydroxychromene-2-carboxylate isomerase proteinALP36_01093Not AvailableNegative5393637 - 539428424114.4
hydrolase, alpha/beta fold proteinALP36_01094Not AvailableNegative5394338 - 539534236380.6

Displaying genes 5021 – 5030 of 5935 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.