Pseudomonas syringae pv. coriandricola strain ICMP 9829

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. coriandricola strain ICMP 9829 is characterized by having a single replicon. This trait is significant as it indicates a streamlined genomic structure, which can influence its metabolic capabilities and adaptability. The strain is documented under the accession number RBTT00000000.1, which provides a reference for researchers seeking to study its genetic makeup or related characteristics. As a member of the Pseudomonas syringae species complex, this strain is known for its role in plant pathology, particularly affecting coriander plants. The understanding of its genomic features, such as the single replicon, may offer insights into how it interacts with plant hosts, possibly affecting virulence and pathogenicity. One biological insight into Pseudomonas syringae pv. coriandricola is its potential impact on agricultural practices, particularly within coriander cultivation. The strain's pathogenic nature suggests that it may pose a threat to crop yields, thereby affecting food supply chains and economic stability for farmers growing coriander. Understanding the genetic basis of this strain could facilitate the development of targeted management strategies to mitigate its impact, enhancing crop resilience and sustainability in agricultural ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. coriandricola strain ICMP 9829
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. coriandricola strain ICMP 9829

Gene Summary

Adenine Count

1333172 bp

Thymine Count

1327194 bp

Guanine Count

1864043 bp

Cytosine Count

1861664 bp

Genome Length

6420155 bp

Protein-coding Genes

5797 genes

Non-Coding Genes

137 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombination factor protein raraALP36_00311Not AvailableNegative3339338 - 334066048816.2
outer-membrane lipoprotein carrier proteinALP36_00312Not AvailableNegative3340678 - 334130122847.6
dna translocase ftskALP36_00313Not AvailableNegative3341378 - 334378387745.8
leucyl/phenylalanyl-trna--protein transferaseALP36_00314Not AvailablePositive3344261 - 334495026173.1
putative arginyl-trna--protein transferaseALP36_00315Not AvailablePositive3345011 - 334571827837.2
translation initiation factor if-1ALP36_00316Not AvailablePositive3345820 - 33460388331.08
atp-dependent clp protease atp-binding subunit clpaALP36_00317Not AvailableNegative3346155 - 334842883583.0
atp-dependent clp protease adapter protein clpsALP36_00318Not AvailableNegative3348459 - 334882113485.0
cold shock domain proteinALP36_00319Not AvailablePositive3349036 - 334932610471.5
isocitrate dehydrogenase, proteinp-dependentALP36_00320Not AvailablePositive3349960 - 335219180816.2

Displaying genes 3171 – 3180 of 5935 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.