Pseudomonas savastanoi pv. nerii strain ICMP 13786

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. nerii strain ICMP 13786 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is classified as heterotrophic, obtaining its energy from organic compounds, and it requires oxygen for growth, making it an aerobe. It is mesophilic, with an optimal growth temperature of 28°C, and can thrive within a range of temperatures favorable for many terrestrial organisms. Pseudomonas savastanoi pv. nerii is known to form single cells rather than clusters, which is characteristic of its cell arrangement. The bacterium has two membranes and possesses a single replicon, indicating a streamlined genetic organization. Its ecological role is that of a free-living organism, which allows it to interact with various environments. This strain has a specific biotic relationship with its host, Nerium oleander, where it is associated with the development of knots, a type of galls or growths on the plant. The presence of this bacterium can have significant implications for the health of Nerium oleander, potentially affecting its growth and overall vitality. Understanding Pseudomonas savastanoi pv. nerii strain ICMP 13786 within its habitat and its interactions with Nerium oleander provides insight into plant-microbe relationships and the ecological dynamics that may influence plant health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. nerii strain ICMP 13786

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. nerii strain ICMP 13786
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Nerium oleander
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. nerii strain ICMP 13786

Gene Summary

Adenine Count

1258408 bp

Thymine Count

1254800 bp

Guanine Count

1737186 bp

Cytosine Count

1736786 bp

Genome Length

6019583 bp

Protein-coding Genes

5487 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
argininosuccinate lyaseALP42_02852Not AvailableNegative5172905 - 517429951804.0
sensor histidine kinase fimsALP42_02853Not AvailablePositive5174433 - 517551540105.5
alginate biosynthesis regulatory protein algrALP42_02854Not AvailablePositive5175512 - 517625827881.9
hypothetical proteinALP42_101886Not AvailableNegative5176296 - 51764184365.22
porphobilinogen deaminaseALP42_02855Not AvailablePositive5176491 - 517743233409.2
hemy domain proteinALP42_02856Not AvailablePositive5179374 - 518061846578.2
disulfide bond formation protein bALP42_02857Not AvailablePositive5180835 - 518136219318.1
regulator of rna polymerase sigma subunit, rsd/algqALP42_100625Not AvailablePositive5181510 - 518201018807.1
peptidyl-prolyl cis-trans isomeraseALP42_02858Not AvailableNegative5182090 - 518277024291.9
alginate regulatory protein algpALP42_02859Not AvailablePositive5182987 - 518398232782.9

Displaying genes 4821 – 4830 of 5615 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
KnotsCausesPMC8815115

Displaying health effects 1 – 1 of 1 in total