Pseudomonas savastanoi pv. nerii strain ICMP 13786

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. nerii strain ICMP 13786 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is classified as heterotrophic, obtaining its energy from organic compounds, and it requires oxygen for growth, making it an aerobe. It is mesophilic, with an optimal growth temperature of 28°C, and can thrive within a range of temperatures favorable for many terrestrial organisms. Pseudomonas savastanoi pv. nerii is known to form single cells rather than clusters, which is characteristic of its cell arrangement. The bacterium has two membranes and possesses a single replicon, indicating a streamlined genetic organization. Its ecological role is that of a free-living organism, which allows it to interact with various environments. This strain has a specific biotic relationship with its host, Nerium oleander, where it is associated with the development of knots, a type of galls or growths on the plant. The presence of this bacterium can have significant implications for the health of Nerium oleander, potentially affecting its growth and overall vitality. Understanding Pseudomonas savastanoi pv. nerii strain ICMP 13786 within its habitat and its interactions with Nerium oleander provides insight into plant-microbe relationships and the ecological dynamics that may influence plant health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. nerii strain ICMP 13786

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. nerii strain ICMP 13786
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Nerium oleander
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. nerii strain ICMP 13786

Gene Summary

Adenine Count

1258408 bp

Thymine Count

1254800 bp

Guanine Count

1737186 bp

Cytosine Count

1736786 bp

Genome Length

6019583 bp

Protein-coding Genes

5487 genes

Non-Coding Genes

128 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative membrane proteinALP42_03125Not AvailableNegative183339 - 18422631753.0
oprd family outer membrane porinALP42_03126Not AvailablePositive184487 - 18515523840.1
phak-like proteinALP42_03127Not AvailablePositive185136 - 18572622121.5
4-carboxymuconolactone decarboxylaseALP42_03128Not AvailableNegative185979 - 18637715009.0
3-carboxy-cis,cis-muconate cycloisomeraseALP42_03129Not AvailableNegative186374 - 18773549024.2
protocatechuate 3,4-dioxygenase, alpha subunitALP42_03130Not AvailableNegative189196 - 18979822357.2
transcriptional regulatorALP42_05251Not AvailableNegative190655 - 19160534574.3
hypothetical proteinALP42_03132Not AvailableNegative191637 - 1918799091.93
putative exopolysaccharide production protein exozALP42_100252Not AvailableNegative191937 - 19301940445.7
transmembrane proteinALP42_03133Not AvailablePositive193251 - 19356511377.5

Displaying genes 291 – 300 of 5615 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
KnotsCausesPMC8815115

Displaying health effects 1 – 1 of 1 in total