Pseudomonas syringae pv. spinaceae strain ICMP 16928

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. spinaceae strain ICMP 16928 is a Gram-negative, rod-shaped bacterium classified as a heterotroph. This strain exhibits significant ecological versatility, as it can thrive in multiple habitats while requiring oxygen for its metabolic processes as an aerobe. P. syringae pv. spinaceae is characterized by its mobility, facilitated by the presence of flagella, which allows it to move through its environment effectively. The bacterium is mesophilic, indicating that it grows optimally within a moderate temperature range. It possesses a single replicon and has a complex cell structure with two membranes, typical of Gram-negative bacteria. Pseudomonas syringae pv. spinaceae strain ICMP 16928 is free-living, suggesting that it does not rely on a host organism for survival and can adapt to various environmental conditions. The ability of this strain to occupy diverse habitats and its heterotrophic energy requirements may contribute to its ecological role in different ecosystems, potentially influencing nutrient cycling and plant interactions. Understanding the traits of P. syringae pv. spinaceae can provide insights into its ecological significance, particularly in relation to its interactions with plants, including potential pathogenic relationships. This bacterium's adaptability and metabolic characteristics underscore its importance in various natural settings and may have implications for agricultural practices, especially concerning plant health and disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. spinaceae strain ICMP 16928

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. spinaceae strain ICMP 16928
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. spinaceae strain ICMP 16928

Gene Summary

Adenine Count

1329091 bp

Thymine Count

1328746 bp

Guanine Count

1871807 bp

Cytosine Count

1868202 bp

Genome Length

6433995 bp

Protein-coding Genes

5825 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
spermidine/putrescine abc transporter, permease proteinALP50_04307Not AvailablePositive6177231 - 617804629582.4
spermidine/putrescine abc transporter, atp-binding proteinALP50_04308Not AvailablePositive6178043 - 617919741607.1
transcriptional regulator, lysr familyALP50_04309Not AvailableNegative6179244 - 618014933543.2
tartrate dehydrogenaseALP50_04310Not AvailablePositive6180262 - 618135640455.2
transcriptional regulator, lysr familyALP50_04311Not AvailableNegative6181362 - 618224032271.9
aldehyde dehydrogenase proteinALP50_04312Not AvailablePositive6182343 - 618373450142.1
putative proteinh-flavin oxidoreductaseALP50_04313Not AvailableNegative6183807 - 618439121767.8
molybdopterin-guanine dinucleotide biosynthesis protein aALP50_100871Not AvailablePositive6184535 - 618515822246.1
putative xanthine dehydrogenase accessory factor xdhcALP50_04314Not AvailableNegative6185139 - 618610733829.2
aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead:aldehyde oxidase and xanthine dehydrogenase, molybdopterin bindingALP50_04315Not AvailableNegative6186110 - 618832679775.8

Displaying genes 5781 – 5790 of 5955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.