Pseudomonas amygdali pv. lachrymans strain N7512

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. lachrymans strain N7512 is a Gram-negative, rod-shaped bacterium known for its mobility. This pathogen primarily resides in aerosols and greenhouses, where it can proliferate under suitable conditions. It is associated with significant agricultural impacts, as it infects a variety of host plants, including Solanum lycopersicum (tomato), Oryza sativa (rice), Cucumis sativus (cucumber), and others such as Olea (olive), Cucumis melo (melon), Citrullus lanatus (watermelon), Avena sativa (oats), and Cucurbita maxima (pumpkin). One of the most notable health effects of P. amygdali pv. lachrymans is its role in causing angular leaf spot (ALS) disease, which can severely affect crop yields. The disease manifests differently among various hosts; for instance, it is particularly recognized in cucumbers as cucumber ALS disease. This highlights the bacterium's pathogenicity, which is relevant not only to cucumbers but also to a broader range of cultivated plants. The strain has a single replicon, indicating a streamlined genetic structure, which may play a role in its adaptability and pathogenic potential within its ecological niches. Understanding the habitats and hosts of P. amygdali pv. lachrymans strain N7512 is crucial for developing effective management strategies to mitigate the impact of ALS disease on agriculture, emphasizing the importance of monitoring and controlling this pathogen in greenhouse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. lachrymans strain N7512

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. lachrymans strain N7512
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataerosols; greenhouses
Biotic relationshipNot Available
Host(s)Solanum lycopersicum, Oryza sativa, Cucumis sativus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitycucumber; Plant

Genome Summary

Pseudomonas amygdali pv. lachrymans strain N7512

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6342 genes

Non-Coding Genes

194 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellin synthesis, negative regulator, flgmALP54_00433Not AvailableNegative6699277 - 669959111039.8
flagellar basal-body p-ring formation protein flgaALP54_05406Not AvailableNegative6699753 - 670139061511.6
chemotaxis protein methyltransferaseALP54_05408Not AvailablePositive6701553 - 670239531451.0
dna-binding transcriptional regulator cynrALP54_00437Not AvailableNegative6702488 - 670339933133.3
cyanate hydrataseALP54_00438Not AvailablePositive6703473 - 670394016993.4
hypothetical proteinALP54_00439Not AvailablePositive6703951 - 670442418562.5
hypothetical proteinALP54_102783Not AvailableNegative6704481 - 67046425499.81
flagellar basal body rod protein flgbALP54_00440Not AvailablePositive6704704 - 670511114785.2
flagellar basal body rod protein flgcALP54_00441Not AvailablePositive6705115 - 670555515724.3
flagellar basal-body rod modification protein flgdALP54_00442Not AvailablePositive6705571 - 670625723563.3

Displaying genes 6361 – 6370 of 6536 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Angular leaf spotCausesPMC7586749
Angular leaf spotCausesPMC6960962
Bacterial angular leaf spotCausesPMC9343901
Angular leaf spot (als) diseaseCausesPMC9936812
Als diseaseCausesPMC9936812
Angular leaf spotCausesPMC9936812
AlsCausesPMC9936812
Cucumber als diseaseCausesPMC9936812

Displaying health effects 1 – 8 of 8 in total