Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain N7512 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5752 genes
Non-Coding Genes
784 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide-binding abc transporter, periplasmic substrate-binding component | ALP54_101363 | Not Available | Positive | 6144547 - 6146163 | 59851.0 |
| nickel/dipeptide/oligopeptide-like abc-type transport system | ALP54_100090 | Not Available | Positive | 6146215 - 6147183 | 35144.9 |
| peptide abc transporter permease | ALP54_02779 | Not Available | Positive | 6147192 - 6148100 | 32453.7 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | ALP54_02780 | Not Available | Positive | 6148117 - 6149118 | 36524.6 |
| peptidase, m20/m25/m40 family | ALP54_100261 | Not Available | Positive | 6150080 - 6151552 | 52771.7 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase and related deacylase | ALP54_100181 | Not Available | Positive | 6151549 - 6152700 | 39943.6 |
| hypothetical protein | ALP54_102276 | Not Available | Negative | 6152481 - 6153050 | 20764.9 |
| amidase protein | ALP54_02781 | Not Available | Positive | 6152823 - 6154346 | 54138.8 |
| quinate dehydrogenase | ALP54_05981 | Not Available | Negative | 6154409 - 6156784 | 84172.1 |
| phosphonate metabolism protein phnp | ALP54_05982 | Not Available | Negative | 6156923 - 6157672 | 27184.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







