Pseudomonas amygdali pv. lachrymans strain N7512

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. lachrymans strain N7512 is a Gram-negative, rod-shaped bacterium known for its mobility. This pathogen primarily resides in aerosols and greenhouses, where it can proliferate under suitable conditions. It is associated with significant agricultural impacts, as it infects a variety of host plants, including Solanum lycopersicum (tomato), Oryza sativa (rice), Cucumis sativus (cucumber), and others such as Olea (olive), Cucumis melo (melon), Citrullus lanatus (watermelon), Avena sativa (oats), and Cucurbita maxima (pumpkin). One of the most notable health effects of P. amygdali pv. lachrymans is its role in causing angular leaf spot (ALS) disease, which can severely affect crop yields. The disease manifests differently among various hosts; for instance, it is particularly recognized in cucumbers as cucumber ALS disease. This highlights the bacterium's pathogenicity, which is relevant not only to cucumbers but also to a broader range of cultivated plants. The strain has a single replicon, indicating a streamlined genetic structure, which may play a role in its adaptability and pathogenic potential within its ecological niches. Understanding the habitats and hosts of P. amygdali pv. lachrymans strain N7512 is crucial for developing effective management strategies to mitigate the impact of ALS disease on agriculture, emphasizing the importance of monitoring and controlling this pathogen in greenhouse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. lachrymans strain N7512

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. lachrymans strain N7512
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataerosols; greenhouses
Biotic relationshipNot Available
Host(s)Solanum lycopersicum, Oryza sativa, Cucumis sativus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitycucumber; Plant

Genome Summary

Pseudomonas amygdali pv. lachrymans strain N7512

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6342 genes

Non-Coding Genes

194 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative membrane proteinALP54_03004Not AvailableNegative4728591 - 472929825596.8
Trna-serNot AvailableNot AvailablePositive4729385 - 4729472Not Available
lysr family transcriptional regulatorALP54_03005Not AvailablePositive4729616 - 473052433299.6
abc transporter periplasmic substrate-binding proteinALP54_06030Not AvailableNegative4730510 - 473128927430.4
citrate-proton symporterALP54_03006Not AvailableNegative4731304 - 473260546676.7
trna 5-methylaminomethyl-2-thiouridine synthase tusdALP54_03007Not AvailablePositive4732714 - 473323218941.6
sulfur relay protein tuscALP54_03008Not AvailablePositive4733234 - 473359612979.5
dsrh proteinALP54_03009Not AvailablePositive4733596 - 473389510900.2
sulfurtransferaseALP54_03010Not AvailablePositive4733892 - 473422712213.8
hypothetical proteinALP54_03011Not AvailablePositive4734224 - 473522537094.6

Displaying genes 4431 – 4440 of 6536 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Angular leaf spotCausesPMC7586749
Angular leaf spotCausesPMC6960962
Bacterial angular leaf spotCausesPMC9343901
Angular leaf spot (als) diseaseCausesPMC9936812
Als diseaseCausesPMC9936812
Angular leaf spotCausesPMC9936812
AlsCausesPMC9936812
Cucumber als diseaseCausesPMC9936812

Displaying health effects 1 – 8 of 8 in total