Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain N7512 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6342 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| syringolide biosynthetic protein avrd1 | ALP54_02324 | Not Available | Negative | 4610804 - 4611739 | 34474.2 |
| transposase protein | ALP54_02325 | Not Available | Negative | 4612097 - 4613326 | 46659.0 |
| type iii effector hopao1 | ALP54_05870 | Not Available | Positive | 4613354 - 4614274 | 33784.3 |
| hypothetical protein | ALP54_200134 | Not Available | Positive | 4614997 - 4615167 | 6525.87 |
| ispsy4, transposase | ALP54_00204 | Not Available | Positive | 4616395 - 4617417 | 38379.5 |
| ispsy4, transposition helper protein | ALP54_00205 | Not Available | Positive | 4617414 - 4618223 | 29733.8 |
| dna topoisomerase | ALP54_06056 | Not Available | Positive | 4618272 - 4618546 | 10363.5 |
| hypothetical protein | ALP54_102434 | Not Available | Negative | 4618547 - 4618771 | 8566.45 |
| ribose-5-phosphate isomerase a | ALP54_04448 | Not Available | Positive | 4618842 - 4619513 | 23389.2 |
| sdia-regulated | ALP54_04449 | Not Available | Negative | 4619559 - 4620464 | 33368.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







