Pseudomonas amygdali pv. lachrymans strain N7512

RodMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas amygdali pv. lachrymans strain N7512 is a Gram-negative, rod-shaped bacterium known for its mobility. This pathogen primarily resides in aerosols and greenhouses, where it can proliferate under suitable conditions. It is associated with significant agricultural impacts, as it infects a variety of host plants, including Solanum lycopersicum (tomato), Oryza sativa (rice), Cucumis sativus (cucumber), and others such as Olea (olive), Cucumis melo (melon), Citrullus lanatus (watermelon), Avena sativa (oats), and Cucurbita maxima (pumpkin). One of the most notable health effects of P. amygdali pv. lachrymans is its role in causing angular leaf spot (ALS) disease, which can severely affect crop yields. The disease manifests differently among various hosts; for instance, it is particularly recognized in cucumbers as cucumber ALS disease. This highlights the bacterium's pathogenicity, which is relevant not only to cucumbers but also to a broader range of cultivated plants. The strain has a single replicon, indicating a streamlined genetic structure, which may play a role in its adaptability and pathogenic potential within its ecological niches. Understanding the habitats and hosts of P. amygdali pv. lachrymans strain N7512 is crucial for developing effective management strategies to mitigate the impact of ALS disease on agriculture, emphasizing the importance of monitoring and controlling this pathogen in greenhouse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas amygdali
Strainpv. lachrymans strain N7512

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas amygdali pv. lachrymans strain N7512
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataerosols; greenhouses
Biotic relationshipNot Available
Host(s)Solanum lycopersicum, Oryza sativa, Cucumis sativus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
Pathogenicitycucumber; Plant

Genome Summary

Pseudomonas amygdali pv. lachrymans strain N7512

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

6342 genes

Non-Coding Genes

194 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxidoreductase, fad-binding proteinALP54_02693Not AvailablePositive4235195 - 423633440511.8
receptor family ligand binding proteinALP54_02694Not AvailablePositive4236331 - 423730835099.8
lysine n6-hydroxylase/l-ornithine n5-oxygenase proteinALP54_02695Not AvailablePositive4237363 - 423868248916.8
pyridoxal-phosphate dependent enzyme family/ornithine cyclodeaminase proteinALP54_02696Not AvailablePositive4238688 - 424087178465.6
hypothetical proteinALP54_02697Not AvailablePositive4240871 - 424261663903.2
threonine efflux proteinALP54_02698Not AvailablePositive4242644 - 424328822986.8
alcohol dehydrogenase, iron-containingALP54_02699Not AvailablePositive4243313 - 424446741147.5
s c beta-lactamaseALP54_101502Not AvailablePositive4244471 - 424566442738.2
transcriptional regulator, arac familyALP54_02700Not AvailableNegative4245624 - 424657734981.1
thij/pfpi proteinALP54_02701Not AvailablePositive4246720 - 424732522304.4

Displaying genes 3971 – 3980 of 6536 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Angular leaf spotCausesPMC7586749
Angular leaf spotCausesPMC6960962
Bacterial angular leaf spotCausesPMC9343901
Angular leaf spot (als) diseaseCausesPMC9936812
Als diseaseCausesPMC9936812
Angular leaf spotCausesPMC9936812
AlsCausesPMC9936812
Cucumber als diseaseCausesPMC9936812

Displaying health effects 1 – 8 of 8 in total