Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain N7512 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6342 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector hopaa1 | ALP54_100350 | Not Available | Negative | 3475521 - 3477065 | 53667.4 |
| hypothetical protein | ALP54_101913 | Not Available | Positive | 3476980 - 3477285 | 10964.1 |
| hypothetical protein | ALP54_02964 | Not Available | Positive | 3477352 - 3478296 | 35172.7 |
| hypothetical protein | ALP54_101380 | Not Available | Negative | 3478336 - 3478464 | 4190.24 |
| sensory box histidine kinase/response regulator | ALP54_101037 | Not Available | Negative | 3478483 - 3479706 | 43070.3 |
| hypothetical protein | ALP54_101858 | Not Available | Positive | 3480865 - 3481179 | 11766.0 |
| marr family transcriptional regulator | ALP54_02965 | Not Available | Negative | 3481387 - 3481815 | 16243.3 |
| 5'-nucleotidase sure | ALP54_02966 | Not Available | Positive | 3481898 - 3482689 | 28446.3 |
| short-chain dehydrogenase/reductase sdr | ALP54_06022 | Not Available | Negative | 3482904 - 3483737 | 29500.9 |
| transcriptional regulatory protein | ALP54_06023 | Not Available | Negative | 3483827 - 3484783 | 35572.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







