Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain N7512 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6342 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii helper protein hrpa2 | ALP54_02956 | Not Available | Negative | 3460408 - 3460722 | 11283.2 |
| type iii transcriptional regulator hrps | ALP54_02957 | Not Available | Negative | 3460816 - 3461727 | 33387.5 |
| hrpr | ALP54_02958 | Not Available | Negative | 3461775 - 3462695 | 34227.7 |
| slt-like protein | ALP54_101566 | Not Available | Negative | 3463779 - 3465251 | 53859.5 |
| type iii effector avre1 | ALP54_02959 | Not Available | Positive | 3465417 - 3470606 | 187769.0 |
| type iii chaperone protein avrf | ALP54_02960 | Not Available | Negative | 3470651 - 3471046 | 14712.5 |
| effector protein hopm1 | ALP54_100652 | Not Available | Negative | 3471124 - 3473358 | 78353.2 |
| type iii chaperone protein shcm | ALP54_02961 | Not Available | Negative | 3473355 - 3473849 | 18145.5 |
| type iii helper protein hrpw1 | ALP54_02962 | Not Available | Positive | 3474153 - 3474539 | 13970.3 |
| type iii helper protein hrpw1 | ALP54_02963 | Not Available | Positive | 3474835 - 3475434 | 21514.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







