Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain N7512 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6342 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline abc transporter periplasmic substrate-binding protein | ALP54_01183 | Not Available | Positive | 3359324 - 3360271 | 34435.4 |
| binding-protein-dependent transport (system) inner membrane component | ALP54_01184 | Not Available | Positive | 3360339 - 3361184 | 30457.3 |
| glycine/betaine/l-proline abc transporter atp-binding subunit | ALP54_01185 | Not Available | Positive | 3361181 - 3362359 | 43410.8 |
| serine hydroxymethyltransferase | ALP54_01186 | Not Available | Positive | 3362629 - 3363879 | 44806.2 |
| sarcosine oxidase, beta subunit | ALP54_01187 | Not Available | Positive | 3363897 - 3365147 | 45312.2 |
| sarcosine oxidase, delta subunit | ALP54_01188 | Not Available | Positive | 3365163 - 3365459 | 11435.4 |
| sarcosine oxidase, subunit alpha | ALP54_01189 | Not Available | Positive | 3365456 - 3368476 | 109476.0 |
| sarcosine oxidase, gamma subunit | ALP54_01190 | Not Available | Positive | 3368528 - 3369160 | 23063.7 |
| formyltetrahydrofolate deformylase | ALP54_01191 | Not Available | Positive | 3369406 - 3370263 | 32119.4 |
| glutathione-independent formaldehyde dehydrogenase | ALP54_01192 | Not Available | Positive | 3370313 - 3371512 | 41822.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







