Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain N7512 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6342 genes
Non-Coding Genes
194 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ectoine/hydroxyectoine abc-type transport system | ALP54_04779 | Not Available | Positive | 2036544 - 2037221 | 24986.4 |
| amino acid abc transporter protein, permease | ALP54_04780 | Not Available | Positive | 2037225 - 2037875 | 24128.3 |
| histidine kinase, hamp region:bacterial chemotaxis sensory transducer | ALP54_100699 | Not Available | Negative | 2038733 - 2040382 | 58972.9 |
| methyl-accepting chemotaxis protein | ALP54_04781 | Not Available | Negative | 2040379 - 2040660 | 9825.0 |
| hypothetical protein | ALP54_101838 | Not Available | Negative | 2040660 - 2040881 | 7969.76 |
| multidrug efflux rnd transporter, membrane fusion protein mexe | ALP54_04782 | Not Available | Positive | 2040976 - 2042217 | 44362.9 |
| multidrug efflux rnd transporter mexf | ALP54_04783 | Not Available | Positive | 2042230 - 2045421 | 115294.0 |
| outer membrane efflux protein | ALP54_06265 | Not Available | Positive | 2045418 - 2046818 | 50622.7 |
| tpr domain protein | ALP54_04785 | Not Available | Positive | 2046950 - 2048056 | 40781.5 |
| transcriptional regulator | ALP54_04786 | Not Available | Positive | 2048533 - 2048904 | 13873.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







