Pseudomonas savastanoi strain ICMP 9421

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi strain ICMP 9421 is a Gram-negative, rod-shaped bacterium classified as a heterotrophic aerobe. This organism exhibits a single-cell arrangement and is motile, possessing flagella that facilitate its movement. It thrives optimally at a temperature of 28°C, indicating its mesophilic nature. The habitat of Pseudomonas savastanoi strain ICMP 9421 is diverse, as it is free-living and not restricted to a specific environment. Its biotic relationships include pathogenic interactions with various plant hosts, specifically Actinidia deliciosa, Actinidia chinensis, Olea europaea, Punica granatum, and Fraxinus excelsior. This bacterium is known to cause several significant plant diseases, including olive knot disease and bacterial canker, affecting both olive trees and kiwifruit, as well as ornamental plants such as Mandevilla spp. Given its role as a plant pathogen, Pseudomonas savastanoi strain ICMP 9421 underscores the importance of understanding microbial interactions within ecosystems. The diseases it causes can lead to substantial agricultural losses, impacting both crop yield and quality. The ecological implications of its pathogenicity highlight the need for effective management strategies to mitigate its effects on economically important plants. Understanding this bacterium's biology and interaction with its hosts is crucial for developing sustainable agricultural practices and protecting plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainstrain ICMP 9421

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi strain ICMP 9421
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Actinidia deliciosa, Actinidia chinensis, Olea europaea
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi strain ICMP 9421 PcsICMP9421_Contig_60,

Gene Summary

Adenine Count

1255255 bp

Thymine Count

1258694 bp

Guanine Count

1742744 bp

Cytosine Count

1742281 bp

Genome Length

6034040 bp

Protein-coding Genes

5421 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
toluene tolerance abc transporter, atp-binding proteinALP59_00864Not AvailableNegative5047038 - 504784729549.9
hypothetical proteinALP59_100993Not AvailablePositive5047857 - 50479945191.23
arabinose 5-phosphate isomeraseALP59_00865Not AvailablePositive5048152 - 504912634505.1
yrbi family phosphataseALP59_00866Not AvailablePositive5049126 - 504966519478.6
hypothetical proteinALP59_00867Not AvailablePositive5049674 - 505024621389.5
abc transporter, atp-binding proteinALP59_00868Not AvailablePositive5050782 - 505150726500.2
rna polymerase sigma-54 factorALP59_00869Not AvailablePositive5051714 - 505318355800.9
ribosomal subunit interface protein raia/yfiaALP59_00870Not AvailablePositive5053259 - 505356711610.2
pts iia-like nitrogen-regulatory protein ptsnALP59_00871Not AvailablePositive5053579 - 505404316593.2
nucleotide-binding proteinALP59_00872Not AvailablePositive5054046 - 505490332282.8

Displaying genes 4671 – 4680 of 5521 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Olive knotCausesPMC10420344
Olive knot diseaseCausesPMC10420344
Olive knot diseaseCausesPMC6638699
Bacterial canker of kiwifruitCausesPMC8815115
Disease of the ornamental plant mandevilla spp.CausesPMC8815115
Bacterial cankerCausesPMC8815115
Bacterial canker diseaseCausesPMC8815115

Displaying health effects 1 – 7 of 7 in total