Pseudomonas savastanoi strain ICMP 9421

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi strain ICMP 9421 is a Gram-negative, rod-shaped bacterium classified as a heterotrophic aerobe. This organism exhibits a single-cell arrangement and is motile, possessing flagella that facilitate its movement. It thrives optimally at a temperature of 28°C, indicating its mesophilic nature. The habitat of Pseudomonas savastanoi strain ICMP 9421 is diverse, as it is free-living and not restricted to a specific environment. Its biotic relationships include pathogenic interactions with various plant hosts, specifically Actinidia deliciosa, Actinidia chinensis, Olea europaea, Punica granatum, and Fraxinus excelsior. This bacterium is known to cause several significant plant diseases, including olive knot disease and bacterial canker, affecting both olive trees and kiwifruit, as well as ornamental plants such as Mandevilla spp. Given its role as a plant pathogen, Pseudomonas savastanoi strain ICMP 9421 underscores the importance of understanding microbial interactions within ecosystems. The diseases it causes can lead to substantial agricultural losses, impacting both crop yield and quality. The ecological implications of its pathogenicity highlight the need for effective management strategies to mitigate its effects on economically important plants. Understanding this bacterium's biology and interaction with its hosts is crucial for developing sustainable agricultural practices and protecting plant health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainstrain ICMP 9421

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi strain ICMP 9421
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Actinidia deliciosa, Actinidia chinensis, Olea europaea
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi strain ICMP 9421 PcsICMP9421_Contig_60,

Gene Summary

Adenine Count

1255255 bp

Thymine Count

1258694 bp

Guanine Count

1742744 bp

Cytosine Count

1742281 bp

Genome Length

6034040 bp

Protein-coding Genes

5421 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nicotinamidase related amidohydrolaseALP59_100613Not AvailablePositive2134548 - 213511720779.5
helicase/snf2 domain-containing proteinALP59_02153Not AvailableNegative2135096 - 2137888105252.0
hypothetical proteinALP59_02154Not AvailableNegative2137964 - 213848819216.1
transcription-repair coupling factorALP59_04974Not AvailableNegative2138500 - 2142090134230.0
glyceraldehyde 3-phosphate dehydrogenase, type iALP59_02155Not AvailablePositive2142143 - 214360653186.6
hypothetical proteinALP59_02156Not AvailablePositive2143733 - 214499545461.7
major facilitator family transporterALP59_02157Not AvailableNegative2145081 - 214637346134.1
thiamine biosynthesis lipoprotein apbeALP59_02158Not AvailablePositive2146751 - 214778237609.3
soluble pyridine nucleotide transhydrogenaseALP59_04976Not AvailablePositive2147910 - 214934352356.5
putative glycerophosphoryl diester phosphodiesteraseALP59_100001Not AvailableNegative2149327 - 215006425383.6

Displaying genes 2061 – 2070 of 5521 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Olive knotCausesPMC10420344
Olive knot diseaseCausesPMC10420344
Olive knot diseaseCausesPMC6638699
Bacterial canker of kiwifruitCausesPMC8815115
Disease of the ornamental plant mandevilla spp.CausesPMC8815115
Bacterial cankerCausesPMC8815115
Bacterial canker diseaseCausesPMC8815115

Displaying health effects 1 – 7 of 7 in total