Pseudomonas savastanoi strain ICMP 13927

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi strain ICMP 13927 is a Gram-negative, rod-shaped bacterium that exhibits aerobic respiration and is classified as a heterotroph. This strain, capable of mobility due to the presence of flagella, thrives optimally at a temperature of 28°C within a mesophilic range. It possesses a single replicon and is characterized by a double-membrane structure. This bacterium has a free-living biotic relationship and demonstrates a diverse habitat range. Notably, Pseudomonas savastanoi strain ICMP 13927 is associated with several plant hosts, including Actinidia deliciosa, Actinidia chinensis, Olea europaea, Punica granatum, and Fraxinus excelsior. It is implicated in several plant diseases, notably olive knot disease and bacterial canker diseases affecting kiwifruit and other ornamental plants such as Mandevilla spp. The presence of Pseudomonas savastanoi in various plant species highlights its ecological significance, particularly in agricultural contexts where it can impact the health of important crops. The ability of this bacterium to cause diseases, such as olive knot and bacterial canker, poses challenges for cultivation and management of affected plants. Understanding the biology and ecology of Pseudomonas savastanoi strain ICMP 13927 can inform strategies for disease prevention and control, thereby contributing to sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainstrain ICMP 13927

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi strain ICMP 13927
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Actinidia deliciosa, Actinidia chinensis, Olea europaea
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi strain ICMP 13927 PceICMP13927_Contig_554,

Gene Summary

Adenine Count

1150416 bp

Thymine Count

1141538 bp

Guanine Count

1600422 bp

Cytosine Count

1610990 bp

Genome Length

5561179 bp

Protein-coding Genes

5305 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transposaseALP60_04947Not AvailablePositive5388169 - 538984362478.6
catechol 1,2-dioxygenaseALP60_03826Not AvailableNegative5389914 - 539084334482.3
muconate cycloisomeraseALP60_03827Not AvailableNegative5391212 - 539233340132.6
benzoate dioxygenase, ferredoxin reductase componentALP60_03828Not AvailableNegative5392391 - 539341337186.9
benzoate 1,2-dioxygenase beta subunitALP60_03829Not AvailableNegative5393514 - 539394215844.8
toluate 1,2-dioxygenase alpha subunitALP60_03830Not AvailableNegative5393945 - 539534852964.3
transcriptional regulatorALP60_03831Not AvailablePositive5395597 - 539659236170.4
gntr family transcriptional regulatorALP60_00067Not AvailableNegative5396738 - 539749627895.3
polysaccharide deacetylase proteinALP60_00068Not AvailablePositive5398344 - 539927335816.3
hypothetical proteinALP60_00069Not AvailablePositive5399270 - 539978518727.3

Displaying genes 5241 – 5250 of 5357 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Olive knotCausesPMC10420344
Olive knot diseaseCausesPMC10420344
Olive knot diseaseCausesPMC6638699
Bacterial canker of kiwifruitCausesPMC8815115
Disease of the ornamental plant mandevilla spp.CausesPMC8815115
Bacterial cankerCausesPMC8815115
Bacterial canker diseaseCausesPMC8815115

Displaying health effects 1 – 7 of 7 in total