Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas savastanoi |
| Strain | strain ICMP 13927 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Actinidia deliciosa, Actinidia chinensis, Olea europaea |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1150416 bp
Thymine Count
1141538 bp
Guanine Count
1600422 bp
Cytosine Count
1610990 bp
Genome Length
5561179 bp
Protein-coding Genes
5305 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase gamma subunit | ALP60_02411 | Not Available | Negative | 399572 - 400204 | 23094.8 |
| sarcosine oxidase alpha subunit | ALP60_04814 | Not Available | Negative | 400256 - 403399 | 114215.0 |
| sarcosine oxidase, delta subunit | ALP60_02413 | Not Available | Negative | 403273 - 403569 | 11392.4 |
| sarcosine oxidase, beta subunit | ALP60_02414 | Not Available | Negative | 403585 - 404835 | 45312.2 |
| serine hydroxymethyltransferase | ALP60_04816 | Not Available | Negative | 404853 - 406106 | 44853.3 |
| hypothetical protein | ALP60_100856 | Not Available | Positive | 406202 - 406324 | 4415.17 |
| glycine/betaine/l-proline abc transporter, permease protein | ALP60_100001 | Not Available | Negative | 407556 - 408536 | 34797.5 |
| glycine betaine/l-proline abc transporter periplasmic substrate-binding protein | ALP60_02416 | Not Available | Negative | 408395 - 409378 | 34806.7 |
| arac family transcriptional regulator | ALP60_02417 | Not Available | Positive | 410177 - 411283 | 41073.8 |
| methyl-accepting chemotaxis protein | ALP60_04818 | Not Available | Negative | 411342 - 412967 | 58529.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Olive knot | Causes | PMC10420344 |
| Olive knot disease | Causes | PMC10420344 |
| Olive knot disease | Causes | PMC6638699 |
| Bacterial canker of kiwifruit | Causes | PMC8815115 |
| Disease of the ornamental plant mandevilla spp. | Causes | PMC8815115 |
| Bacterial canker | Causes | PMC8815115 |
| Bacterial canker disease | Causes | PMC8815115 |







