Pseudomonas savastanoi strain ICMP 13685

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi strain ICMP 13685 is a Gram-negative, rod-shaped bacterium that is classified as a heterotrophic aerobe. This organism has a single cell arrangement and possesses flagella, enabling mobility. It thrives optimally at a temperature of 28°C and falls within a mesophilic temperature range. The bacterium is free-living and has been identified in diverse habitats. It plays a role in the biotic relationships with various plant hosts, including Actinidia deliciosa, Actinidia chinensis, Olea europaea, Punica granatum, and Fraxinus excelsior. Pseudomonas savastanoi strain ICMP 13685 is known for its association with several plant diseases, notably olive knot disease, bacterial canker, and bacterial canker of kiwifruit. It is also implicated in diseases affecting ornamental plants such as Mandevilla spp. With one replicon and a double-membrane structure, this strain exhibits characteristics typical of Pseudomonas species. Its pathogenic relationship with certain hosts highlights the ecological impact it can have on agricultural and ornamental plants. Understanding the traits and behavior of Pseudomonas savastanoi strain ICMP 13685 is crucial for managing the diseases it causes and developing strategies to mitigate its effects on affected crops.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainstrain ICMP 13685

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi strain ICMP 13685
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Actinidia deliciosa, Actinidia chinensis, Olea europaea
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi strain ICMP 13685 PbrICMP13685_Contig_229,

Gene Summary

Adenine Count

1203521 bp

Thymine Count

1200830 bp

Guanine Count

1651314 bp

Cytosine Count

1655252 bp

Genome Length

5780624 bp

Protein-coding Genes

5361 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoserine phosphataseALP70_101445Not AvailablePositive3081275 - 308236940912.3
trna -methyltransferaseALP70_02344Not AvailableNegative3082422 - 308315927556.1
thiazole synthaseALP70_02345Not AvailableNegative3083167 - 308396128294.7
thiamine biosynthesis protein thisALP70_02346Not AvailableNegative3084014 - 30842146997.36
membrane proteinALP70_02347Not AvailableNegative3084330 - 308471013284.8
monofunctional biosynthetic peptidoglycan transglycosylaseALP70_02348Not AvailablePositive3084722 - 308550129490.3
rna polymerase sigma factor rpohALP70_04759Not AvailableNegative3085601 - 308645532575.6
cell division protein ftsxALP70_02349Not AvailableNegative3086574 - 308760837322.7
cell-division atp-binding protein ftseALP70_02350Not AvailableNegative3087605 - 308827624610.3
signal recognition particle receptor ftsyALP70_02351Not AvailableNegative3088273 - 308976352738.5

Displaying genes 2941 – 2950 of 5408 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Olive knotCausesPMC10420344
Olive knot diseaseCausesPMC10420344
Olive knot diseaseCausesPMC6638699
Bacterial canker of kiwifruitCausesPMC8815115
Disease of the ornamental plant mandevilla spp.CausesPMC8815115
Bacterial cankerCausesPMC8815115
Bacterial canker diseaseCausesPMC8815115

Displaying health effects 1 – 7 of 7 in total